Insertion junction: LMJ.RY0402.143159_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.143159
Chromosome:chromosome 10
Location:6293317
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre10.g465050 (1 of 1) PTHR19303//PTHR19303:SF285 - TRANSPOSON // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCACTGAGGAGAGCGACATGGACGCATAA
Internal bar code:ATGGGGACTGCGGACCCATGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:251
LEAP-Seq percent confirming:99.2806
LEAP-Seq n confirming:1794
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGATTGCAATTGACTCGCTC
Suggested primer 2:GTCTCAGACGGTGCTCAACA