Insertion junction: LMJ.RY0402.143216_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.143216
Chromosome:chromosome 6
Location:4067995
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre06.g278212 CGL46 Conserved in the Green Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAGGTCCAGGTCGCGCTCGCCGATGCAG
Internal bar code:CCTGAGAAGTGTGCTAAGTTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:304
LEAP-Seq percent confirming:75.7353
LEAP-Seq n confirming:103
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TCGGCTAAGCTTTCAATCGT
Suggested primer 2:TGTTCGAGTTCGTGCACTTC