Insertion junction: LMJ.RY0402.143236_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.143236
Chromosome:chromosome 12
Location:1820268
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g511950 (1 of 1) IPR003591//IPR013210 - Leucine-rich repeat, typical subtype // Leucine-rich repeat-containing N-terminal, plant-type CDS/intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCCTGTTCCTGAACAACAACCACCTGAG
Internal bar code:CAGGATAGGACACCCTCGCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:636
LEAP-Seq percent confirming:99.5267
LEAP-Seq n confirming:2313
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AGTTAACCCCCACTTACCCG
Suggested primer 2:TACTGATGAGCAGTGTCGGC