Insertion junction: LMJ.RY0402.143393_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.143393
Chromosome:chromosome 8
Location:3953356
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre08.g378650 CGl131 (1 of 18) IPR011051 - RmlC-like cupin domain; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGCAACCCTACACCCGCCTGCCCCCCCAC
Internal bar code:TCTCTTTCCTGTTCGCCCAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:35
LEAP-Seq percent confirming:98.5294
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GACACCACAGCAATGACACC
Suggested primer 2:GCTTCGTCAAGTTCGAGGTC