Insertion junction: LMJ.RY0402.143405_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.143405
Chromosome:chromosome 5
Location:1471641
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g243800 CPLD45,PSB27 (1 of 1) K08902 - photosystem II Psb27 protein (psb27); conserved expressed protein involved in PSII biogenesis 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATAAACGGATCGACAAAAAACGGGAGCTCA
Internal bar code:TCGGATCCGCGACTGAGACGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:704
LEAP-Seq percent confirming:69.8113
LEAP-Seq n confirming:444
LEAP-Seq n nonconfirming:192
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCGTAGATGACCCTGACC
Suggested primer 2:TACCAGCCCAAACTTAACCG