Insertion junction: LMJ.RY0402.143432_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.143432
Chromosome:chromosome 10
Location:706274
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre10.g422450 GGT1,PGSIP6 (1 of 1) PTHR11183//PTHR11183:SF39 - GLYCOGENIN // PROTEIN GYG-1, ISOFORM A; Plant glycogenin-like starch initiation protein 6 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGAACCCACAAACGCACACAACGCCACCT
Internal bar code:TTAGCGGTCTTGGTGTAGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:138
LEAP-Seq percent confirming:99.4292
LEAP-Seq n confirming:871
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTGCACATCAACTCCTTC
Suggested primer 2:GGGAAATCTCAGATGCCAAA