Insertion junction: LMJ.RY0402.143476_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.143476
Chromosome:chromosome 8
Location:3369959
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre08.g374250 SAG1 (1 of 80) IPR003882 - Pistil-specific extensin-like protein; Plus agglutinin protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCCATACACAATTAAGCTCTCCCTTACC
Internal bar code:TAAATCGGTATTCGACTACCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:50
LEAP-Seq percent confirming:33.7531
LEAP-Seq n confirming:134
LEAP-Seq n nonconfirming:263
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACACACACACACACCG
Suggested primer 2:CACTGATACAACCGACAGCG