Insertion junction: LMJ.RY0402.143529_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.143529
Chromosome:chromosome 12
Location:2252279
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g508000 TIC40 (1 of 5) IPR006636 - Heat shock chaperonin-binding; Putative chloroplast enveloppe protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCTCAACCCGCTGCGCGCGGGTAGCCAC
Internal bar code:CGGCAGGAAATAACAAGGCGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:339
LEAP-Seq percent confirming:98.0673
LEAP-Seq n confirming:103714
LEAP-Seq n nonconfirming:2044
LEAP-Seq n unique pos:90

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGTGTGTTGACTGTCGCT
Suggested primer 2:GAGTGTGTATGCATGTCGGG