Insertion junction: LMJ.RY0402.143598_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.143598
Chromosome:chromosome 17
Location:4040813
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g729101 PHC37 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin; Putative pherophorin-chlamydomonas homolog CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGAAGTAAGCCTTCTTCTTGCCGCCCCT
Internal bar code:GCAGGTATCGCTCAAAAGGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:888
LEAP-Seq percent confirming:98.8053
LEAP-Seq n confirming:4218
LEAP-Seq n nonconfirming:51
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCCTTCGAGTATGAAGC
Suggested primer 2:CTTCCATGTACCGTACCGCT