Insertion junction: LMJ.RY0402.143619_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.143619
Chromosome:chromosome 1
Location:3354488
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre01.g021200 CGL47 conserved protein with F-box domain; (1 of 10) IPR000104//IPR001810 - Antifreeze protein, type I // F-box domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCACCCAGAAGCCGTTGCGTGCGCTCCGC
Internal bar code:CAGATGAGATAAATGTCGCACT

Confirmation - LEAP-Seq

LEAP-Seq distance:540
LEAP-Seq percent confirming:97.7876
LEAP-Seq n confirming:221
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGCTTATAGGAAGGCGCA
Suggested primer 2:CGGTGTTGCGTGTGTATTTG