Insertion junction: LMJ.RY0402.143641_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.143641
Chromosome:chromosome 6
Location:5528731
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g285001 (1 of 1) PTHR34180//PTHR34180:SF1 - FAMILY NOT NAMED // MUTANT TAN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCGGTGCGTGGTGGAGGACGAAGGCAG
Internal bar code:GATTTCTCATTCTTTGAAGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:461
LEAP-Seq percent confirming:68.5674
LEAP-Seq n confirming:4810
LEAP-Seq n nonconfirming:2205
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGTCGCCCTGAGAGTTGC
Suggested primer 2:CCTACCTGGGTCACGACAGT