Insertion junction: LMJ.RY0402.143797_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.143797
Chromosome:chromosome 9
Location:2111939
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g393650 (1 of 1) PF00069//PF01590 - Protein kinase domain (Pkinase) // GAF domain (GAF) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTGGGGCTGACTGAGAACGCCCCCAGCG
Internal bar code:CGGCCAGTCAGTTTGTGACTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:486
LEAP-Seq percent confirming:98.2851
LEAP-Seq n confirming:9514
LEAP-Seq n nonconfirming:166
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTGAGTGAGCGAGTCAGC
Suggested primer 2:GATAAGAGCGTCAAGCGTCC