Insertion junction: LMJ.RY0402.143861_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.143861
Chromosome:chromosome 3
Location:762813
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g146267 (1 of 2) IPR000571//IPR002110//IPR020683 - Zinc finger, CCCH-type // Ankyrin repeat // Ankyrin repeat-containing domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGAGTTGCGAAGAAGCACGGCTCGGGCT
Internal bar code:CCTGTCGCTGCAGTTGTTTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:961
LEAP-Seq percent confirming:99.7336
LEAP-Seq n confirming:1123
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAGAATTCCCATACGCTA
Suggested primer 2:CGTAGCCTCCCTTGTGAGAG