Insertion junction: LMJ.RY0402.144003_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.144003
Chromosome:chromosome 9
Location:3675120
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g390726 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCAAAACACAGCAGCAACCCAAGTCTCG
Internal bar code:GTCTGGCCGCAATGCAGCTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:387
LEAP-Seq percent confirming:10.9895
LEAP-Seq n confirming:673
LEAP-Seq n nonconfirming:5451
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTGCCTTAAGCCAGCATT
Suggested primer 2:AAGGCTGTCACCGTATGGAC