Insertion junction: LMJ.RY0402.144051_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.144051
Chromosome:chromosome 12
Location:6063910
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g535400 (1 of 1) IPR000104//IPR003590//IPR006553 - Antifreeze protein, type I // Leucine-rich repeat, ribonuclease inhibitor subtype // Leucine-rich repeat, cysteine-containing subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCTAGTACCGGCACCGGGGTGCGTGCCT
Internal bar code:TCGCCATTGCGTGTCTGGAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:220
LEAP-Seq percent confirming:99.8134
LEAP-Seq n confirming:535
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TCCAGTTCCTGTTCTCCACC
Suggested primer 2:ATTAGAGGACGTGTGGTGGC