Insertion junction: LMJ.RY0402.144051_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.144051
Chromosome:chromosome 12
Location:6063952
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g535400 (1 of 1) IPR000104//IPR003590//IPR006553 - Antifreeze protein, type I // Leucine-rich repeat, ribonuclease inhibitor subtype // Leucine-rich repeat, cysteine-containing subtype intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCTTTGTAGTGGCTGTGCAGCGGACAGT
Internal bar code:GGGCCAGGCGAAGATTTGTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:155
LEAP-Seq percent confirming:62.887
LEAP-Seq n confirming:1747
LEAP-Seq n nonconfirming:1031
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TCCAGTTCCTGTTCTCCACC
Suggested primer 2:ATTAGAGGACGTGTGGTGGC