Insertion junction: LMJ.RY0402.144071_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.144071
Chromosome:chromosome 5
Location:2703607
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g236700 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGACCGGGCGCTGATGCGGTTTGAGTT
Internal bar code:GCTATTCTGTAGGCGACTGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:533
LEAP-Seq percent confirming:94.4944
LEAP-Seq n confirming:5149
LEAP-Seq n nonconfirming:300
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTACACGATACCCAAGCG
Suggested primer 2:GTAAACACACGCACCGTGAC