Insertion junction: LMJ.RY0402.144572_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.144572
Chromosome:chromosome 12
Location:6238525
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g536900 (1 of 1) IPR000104//IPR003072//IPR003495//IPR011629//IPR012336//IPR027417 - Antifreeze protein, type I // Orphan nuclear receptor, NOR1 type // CobW/HypB/UreG domain // Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal // Thioredoxin-like fold // P-loop containing nucleoside triphosphate hydrolase; Putative metallochaperone intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAGATTTTATCGCTTGCAACTAACCCCTC
Internal bar code:AGGCGGCGCCCACATTGCCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:292
LEAP-Seq percent confirming:98.8926
LEAP-Seq n confirming:893
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGTGTGTGTGTGTGTGT
Suggested primer 2:CCCAGTGTTTTTCCTTTCCA