Insertion junction: LMJ.RY0402.144771_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.144771
Chromosome:chromosome 3
Location:386121
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g144887 (1 of 1) IPR000048//IPR003590//IPR006553 - IQ motif, EF-hand binding site // Leucine-rich repeat, ribonuclease inhibitor subtype // Leucine-rich repeat, cysteine-containing subtype 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTGTGGGTTTGGGTCAGCGCCACTCAGG
Internal bar code:GCCAGTGCACCGGGTTGCCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1205
LEAP-Seq percent confirming:99.2273
LEAP-Seq n confirming:18750
LEAP-Seq n nonconfirming:146
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGCTTAAGCATGCTGGTC
Suggested primer 2:GTACACACGCAATGGTTTCG