Insertion junction: LMJ.RY0402.144840_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.144840
Chromosome:chromosome 10
Location:3258464
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre10.g443100 (1 of 1) IPR001214//IPR023220 - SET domain // Type IV secretion system, VirB5-domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGTTCTGGCCGCTGCCCTCGGACGTGT
Internal bar code:CGGGGGTGCTACGTTCGGGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:774
LEAP-Seq percent confirming:99.6231
LEAP-Seq n confirming:1586
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCTCCCACTCTGCCTTAT
Suggested primer 2:CACCAACAAGGCACTAAGCA