Insertion junction: LMJ.RY0402.144843_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.144843
Chromosome:chromosome 7
Location:2428732
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre07.g328900 CDPK3,CDPK9 (1 of 6) PTHR24349//PTHR24349:SF23 - SERINE/THREONINE-PROTEIN KINASE // MAP KINASE-ACTIVATED PROTEIN KINASE 5; Calcium/calmodulin-dependent protein kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCTGTCGGGTCTGCCGCCCTTCTGGGGC
Internal bar code:TAGGGTTGGAGGACGCGGGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:649
LEAP-Seq percent confirming:99.8354
LEAP-Seq n confirming:1213
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGAGGGATAGCGGACATC
Suggested primer 2:TCCGTCTTGAAGTCGATGTG