Insertion junction: LMJ.RY0402.145163_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.145163
Chromosome:scaffold 19
Location:7473
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre19.g750147 (1 of 4) IPR017956//IPR020478 - AT hook, DNA-binding motif // AT hook-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACACACGCAGGATGGAGGTGTGGCGAAAC
Internal bar code:TGGACACACGTGGCAAGTGGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:717
LEAP-Seq percent confirming:99.3762
LEAP-Seq n confirming:5735
LEAP-Seq n nonconfirming:36
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAAAGTGGAGTTACACGA
Suggested primer 2:CTATAAACGCAACCCTCCCA