Insertion junction: LMJ.RY0402.145328_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.145328
Chromosome:chromosome 10
Location:2169585
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre10.g433650 TMC3 (1 of 4) 2.1.1.178 - 16S rRNA (cytosine(1407)-C(5))-methyltransferase; putative tRNA (cytosine-5)-methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCCCATTGTTTTCAGATCAGCGGGGGGA
Internal bar code:TGGGGCCCCGGTTATGTAGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:434
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:71
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TTATGGAAACCAAACCCCAG
Suggested primer 2:GTCTGGAGCAAGGTCTGGAG