Insertion junction: LMJ.RY0402.145543_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.145543
Chromosome:chromosome 12
Location:6248454
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g536900 (1 of 1) IPR000104//IPR003072//IPR003495//IPR011629//IPR012336//IPR027417 - Antifreeze protein, type I // Orphan nuclear receptor, NOR1 type // CobW/HypB/UreG domain // Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal // Thioredoxin-like fold // P-loop containing nucleoside triphosphate hydrolase; Putative metallochaperone 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGATCCCCTGTCCGCACCTATTGCTAAA
Internal bar code:CAGAGTTACTGAAAGGCAAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:487
LEAP-Seq percent confirming:98.3405
LEAP-Seq n confirming:3437
LEAP-Seq n nonconfirming:58
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTTGGCCCACTCCTGTAT
Suggested primer 2:CTCCTCCTCTCATGCTGTCC