Insertion junction: LMJ.RY0402.145627_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.145627
Chromosome:chromosome 3
Location:6182967
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g192250 PHC69 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin; Pherophorin-chlamydomonas homolog 69 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTCGGCTGCGGTAGAGGTGGCGATTGCCG
Internal bar code:AATCGGGGACAGCCTAAGCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:320
LEAP-Seq percent confirming:64.6207
LEAP-Seq n confirming:4106
LEAP-Seq n nonconfirming:2248
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGGTTTGACCGCTACCAG
Suggested primer 2:GATTGTGCAAGACCTGCTGA