Insertion junction: LMJ.RY0402.145778_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.145778
Chromosome:chromosome 17
Location:5119762
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g735021 (1 of 6) PTHR10582 - TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN CDS|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGCCGCCAACACACTCGCCACCACAGCC
Internal bar code:GGACTAGGCAGATATTGTTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:146
LEAP-Seq percent confirming:68.75
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGTGTGTGTGTGTGTGT
Suggested primer 2:CCAGCCCAAACTAAACCAAA