Insertion junction: LMJ.RY0402.145900_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.145900
Chromosome:chromosome 11
Location:2644076
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g476500 PAO7 Pheophorbide a oxygenase-related protein; (1 of 8) 1.14.12.20 - Pheophorbide a oxygenase / Pheide a oxygenase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTCAGTGCCCCTGCTAGGCAGAAACTTTG
Internal bar code:ATAGGTCGGGTACCGACTGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1210
LEAP-Seq percent confirming:45.2478
LEAP-Seq n confirming:1671
LEAP-Seq n nonconfirming:2022
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTGGTGGGTCTGTCTGGT
Suggested primer 2:TGCTCTTTAACACAGGTGCG