Insertion junction: LMJ.RY0402.145924_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.145924
Chromosome:chromosome 6
Location:5434021
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g284250 LHCBM8 (1 of 6) K08912 - light-harvesting complex II chlorophyll a/b binding protein 1 (LHCB1); Light-harvesting Chlorophyll a/b binding protein of LHCII 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTGCACAGCGAATGGTGCAACGAATTGT
Internal bar code:TGGCATTTAATACAGCGACGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:549
LEAP-Seq percent confirming:81.8342
LEAP-Seq n confirming:928
LEAP-Seq n nonconfirming:206
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CATGTAGCAAAGCCTCACGA
Suggested primer 2:TAGTCAGCATGCATTAGCGG