Insertion junction: LMJ.RY0402.145929_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.145929
Chromosome:chromosome 10
Location:363336
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre10.g420500 (1 of 6) PTHR10117 - TRANSIENT RECEPTOR POTENTIAL CHANNEL 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTTTAAAAGGCGCAAGGAACGAGCAACA
Internal bar code:TCATCCTGCCGGCTAAGGCCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:293
LEAP-Seq percent confirming:81.0373
LEAP-Seq n confirming:2953
LEAP-Seq n nonconfirming:691
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCAACACCCCAACGTAGT
Suggested primer 2:GCAGCAGCAGTAGCAGTGAC