Insertion junction: LMJ.RY0402.146022_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.146022
Chromosome:chromosome 1
Location:6444308
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g045800 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCCAACAGAGGAGCTAGTACGGCAACAA
Internal bar code:CTCCGGAAACGTGGGTGATTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:578
LEAP-Seq percent confirming:98.8134
LEAP-Seq n confirming:1832
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGCATCTCGTAGAAAGTC
Suggested primer 2:ATGACCGGTAGTATGGCTGC