Insertion junction: LMJ.RY0402.146229_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.146229
Chromosome:chromosome 6
Location:6427939
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g292450 PUS13 RNA pseudouridine synthase; (1 of 1) 5.4.99.44 - Mitochondrial tRNA pseudouridine(27/28) synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAGCGAGGGTGTCGACACTCCAGACGGT
Internal bar code:GATTCGAAGTCTACGGGCGCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:232
LEAP-Seq percent confirming:99.7423
LEAP-Seq n confirming:6967
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGAGACAAGACCCGAAAG
Suggested primer 2:AGGGCCCTCATTAGCAATTT