Insertion junction: LMJ.RY0402.146312_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.146312
Chromosome:chromosome 5
Location:352455
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g233304 CHI3 (1 of 2) K01183 - chitinase (E3.2.1.14); Chitinase-like hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTGGGCGCATGCCGCCACGCACACAGT
Internal bar code:GTGCGTCGAAACATGTTCACC

Confirmation - LEAP-Seq

LEAP-Seq distance:286
LEAP-Seq percent confirming:91.1111
LEAP-Seq n confirming:984
LEAP-Seq n nonconfirming:96
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:ACACGAATGACGAGTGTTGC
Suggested primer 2:CGTGATATGCAGGGAAAGGT