Insertion junction: LMJ.RY0402.146489_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.146489
Chromosome:chromosome 2
Location:3084317
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g095053 5'UTR_intron|outside_mRNA
Cre02.g095054 3'UTR_intron|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCGGTACAGCCAACAAGCCCGCCAACAA
Internal bar code:ACATCGATGGGAGTTCGTGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1052
LEAP-Seq percent confirming:97.9691
LEAP-Seq n confirming:1013
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GGAACATCCAAAGGGTAGCA
Suggested primer 2:TTCTTAGCGTTGCCCTCAGT