Insertion junction: LMJ.RY0402.146512_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.146512
Chromosome:chromosome 2
Location:1429511
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre02.g083550 (1 of 1) PF01494//PF05834 - FAD binding domain (FAD_binding_3) // Lycopene cyclase protein (Lycopene_cycl) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGATCCAACTCAGTTGGTACGGCGTCGGG
Internal bar code:GGGGACCCCAGTTGCGCAGACC

Confirmation - LEAP-Seq

LEAP-Seq distance:891
LEAP-Seq percent confirming:99.0629
LEAP-Seq n confirming:5180
LEAP-Seq n nonconfirming:49
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTGTGTGTGTGCGTGATT
Suggested primer 2:TCTTTGCGCTTTGTTTTCCT