Insertion junction: LMJ.RY0402.146530_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.146530
Chromosome:chromosome 7
Location:4168640
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre07.g342450 SEE3 Putative splicing endonuclease positive effector; (1 of 3) K10706 - senataxin [EC:3.6.4.-] (SETX, ALS4) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACGCATGCAGGCGTGGCGGCACTGCGAG
Internal bar code:TAACCGAGGCACTCCGTATGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:280
LEAP-Seq percent confirming:77.349
LEAP-Seq n confirming:2626
LEAP-Seq n nonconfirming:769
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTGATGGGTGTGCACGATAC
Suggested primer 2:AGGTGGTGGGGTAATGTGAA