Insertion junction: LMJ.RY0402.146581_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.146581
Chromosome:chromosome 17
Location:27722
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre17.g696300 (1 of 1) PTHR12360//PTHR12360:SF1 - NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1 // NF-X1-TYPE ZINC FINGER PROTEIN NFXL1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACTTGGCGAGCATGCGACTTGCCGTACG
Internal bar code:TCGACTCTCGGATCATCTACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:832
LEAP-Seq percent confirming:55.75
LEAP-Seq n confirming:2230
LEAP-Seq n nonconfirming:1770
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TTCGAGTGACTGCAGATTGG
Suggested primer 2:TGACACAGTCGGAAGCTTTG