Insertion junction: LMJ.RY0402.146633_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.146633
Chromosome:chromosome 9
Location:844109
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g401750 (1 of 3) PTHR10696 - GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED; Similar to conserved hypothetical protein in bacteria intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTACAAATTCGTGGTTGCGGTGAGAAAGCT
Internal bar code:GCACGTAGCTGAGATCGCGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:553
LEAP-Seq percent confirming:99.654
LEAP-Seq n confirming:288
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTCCGGAAAGGTAGAAA
Suggested primer 2:TGCACATGACAGTTGCTTGA