Insertion junction: LMJ.RY0402.146801_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.146801
Chromosome:chromosome 8
Location:4720417
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre08.g384100 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGCCCAAAAAGGCCTCTGGCGGACGAAA
Internal bar code:GGGCCGTCTCGAGTGCAAAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:820
LEAP-Seq percent confirming:52.8541
LEAP-Seq n confirming:500
LEAP-Seq n nonconfirming:446
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AGCGGTCGAGACAGAAGGTA
Suggested primer 2:GCATTCGCATTCACTAGCAA