Insertion junction: LMJ.RY0402.146884_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.146884
Chromosome:chromosome 9
Location:528557
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g404000 CPLD59 (1 of 1) PF00805 - Pentapeptide repeats (8 copies) (Pentapeptide); thylakoid lumenal 17.4 kDa protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAAGCCAGTGGACATAAAGCCAGCGGATC
Internal bar code:CTTCGACCCACTCGTCCGGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:932
LEAP-Seq percent confirming:99.4951
LEAP-Seq n confirming:2562
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTTGAGCCTTTCATTCCT
Suggested primer 2:GCGTAGCAAGAAGGGACAAG