Insertion junction: LMJ.RY0402.146957_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.146957
Chromosome:chromosome 9
Location:3075311
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g387100 CGL12,PTST1 (1 of 5) PTHR10343 - 5'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT; Protein targeting to starch 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCTGCCGGGCCGCTACCGGGCCAAGTT
Internal bar code:GGGCGTTCAGTCAGGTCCCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:922
LEAP-Seq percent confirming:99.8065
LEAP-Seq n confirming:3611
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGTAGGAGACGCTGTCCG
Suggested primer 2:CAGCTCAAAGTCAAAAGGGC