Insertion junction: LMJ.RY0402.147101_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.147101
Chromosome:chromosome 16
Location:6219183
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g675100 CPLD53 Conserved in the Plant Lineage and Diatoms; (1 of 3) PTHR31319:SF10 - ZINC FINGER PROTEIN CONSTANS-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACTCTTCGCGCGGTGAAACATGCAACAC
Internal bar code:AGGCAGTTCTGCGGCGGCTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:778
LEAP-Seq percent confirming:94.0024
LEAP-Seq n confirming:3119
LEAP-Seq n nonconfirming:199
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ATCCCTGGCCTTACGAAACT
Suggested primer 2:GTTCCATTTGAAGTTGCGGT