Insertion junction: LMJ.RY0402.147215_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.147215
Chromosome:chromosome 13
Location:4616372
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g604050 (1 of 1) IPR002048//IPR006626//IPR011050 - EF-hand domain // Parallel beta-helix repeat // Pectin lyase fold/virulence factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGTGTGCGCGATGGAGGGTCGGCAGAG
Internal bar code:GTTAACATTACTCTTTATCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1066
LEAP-Seq percent confirming:99.8963
LEAP-Seq n confirming:963
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:ACCAAACCCTGCTGCAATAC
Suggested primer 2:ATTGGAATGATGGGTTGGAA