Insertion junction: LMJ.RY0402.147242_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.147242
Chromosome:chromosome 12
Location:3359772
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g497350 PPR13 PentatricoPeptide Repeat protein 13 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCGGCAACCATGACAAGAACGGCTCTGC
Internal bar code:ACGCCTGGTCGAGGGCGGGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:105
LEAP-Seq percent confirming:99.7845
LEAP-Seq n confirming:1852
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAAGTATGGGCTTTCAGG
Suggested primer 2:AGCGACGACATAAGGTCCAC