Insertion junction: LMJ.RY0402.147259_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.147259
Chromosome:chromosome 12
Location:1824599
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g511950 (1 of 1) IPR003591//IPR013210 - Leucine-rich repeat, typical subtype // Leucine-rich repeat-containing N-terminal, plant-type 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGAGCGCGGCGGCTGGACGGGCCAGCGGC
Internal bar code:ATGGGTTCTTGGGACACGCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:348
LEAP-Seq percent confirming:85.9192
LEAP-Seq n confirming:6291
LEAP-Seq n nonconfirming:1031
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:TTACCATACCGGTGCACTCA
Suggested primer 2:GGATATTGGTGATGGAACGG