Insertion junction: LMJ.RY0402.147295_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.147295
Chromosome:chromosome 14
Location:876264
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre14.g613450 CGL87 (1 of 1) PTHR12818:SF0 - NEF-ASSOCIATED PROTEIN 1; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAAGACGTGGTTGCAGGCATAGCGTTTC
Internal bar code:TGAGGGTCGACCAGCTCGCCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:552
LEAP-Seq percent confirming:99.2019
LEAP-Seq n confirming:3853
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GTCAAGGGGAGAAAAGGAGG
Suggested primer 2:ATTTGAGAAGGCAAGCGAAA