Insertion junction: LMJ.RY0402.147399_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.147399
Chromosome:chromosome 7
Location:5176948
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre07.g348450 (1 of 18) K13412 - calcium-dependent protein kinase (CPK) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGAGTTGTACCACCACGATGACTTTGAT
Internal bar code:ACTCATTGGCGACTCACGAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:987
LEAP-Seq percent confirming:99.1936
LEAP-Seq n confirming:615
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GGCGGAGTGTCACGTTATTT
Suggested primer 2:GAAGCTAGGTGGCATGAAGC