Insertion junction: LMJ.RY0402.147533_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.147533
Chromosome:chromosome 10
Location:3258288
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre10.g443100 (1 of 1) IPR001214//IPR023220 - SET domain // Type IV secretion system, VirB5-domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTTGCGAAACACCCGCAACCGTGACCCG
Internal bar code:CTTTCCGCAAGGTCGCGACCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:940
LEAP-Seq percent confirming:98.5583
LEAP-Seq n confirming:2256
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCCCAAACTAAACCAAA
Suggested primer 2:GCACATGCAACAGCATCTTT