Insertion junction: LMJ.RY0402.147541_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.147541
Chromosome:chromosome 1
Location:595637
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g003463 (1 of 1) K08735 - DNA mismatch repair protein MSH2 (MSH2) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGATGTCACGGCGACACGGAAGAGCTGCTG
Internal bar code:TACTAACTAGGTCCAACGGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:579
LEAP-Seq percent confirming:98.9076
LEAP-Seq n confirming:2988
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGTGGTCGCAACACATAC
Suggested primer 2:ATGTGTAGGGCTACAACCGC