Insertion junction: LMJ.RY0402.147799_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.147799
Chromosome:chromosome 3
Location:7643386
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g204200 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGGCTAGGCTCCAAGCACAGAAGCGGCAT
Internal bar code:ACTATGCGACTGTGCACATAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:640
LEAP-Seq percent confirming:99.076
LEAP-Seq n confirming:1394
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ATGGTGGCGACACATAGTGA
Suggested primer 2:ACGTGCTGTTCGTAGCATTG