Insertion junction: LMJ.RY0402.147884_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.147884
Chromosome:chromosome 12
Location:3326769
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g497700 SNE8 (1 of 8) PTHR10366:SF411 - HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173 PROTEIN; Cinnamoyl-CoA reductase/flavanone 4-reductase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGCTGAGGTGCGATACGCACCCAGCAA
Internal bar code:CCCCATCCGTTGGATGGAAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:812
LEAP-Seq percent confirming:99.0991
LEAP-Seq n confirming:330
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CTTACTCTGGGAGCACGAGG
Suggested primer 2:TGCTGTTGTGCGAAGGATAG